A Better Way to Understand How and Why Cells Die

Real-time, up-to-the-minute access to information provides new opportunities for scientists to monitor cellular events in ever more meaningful ways. Real-time cytotoxicity and cell viability assay reagents now allow constant monitoring of cell health status without the need to lyse or remove aliquots from plates for measurement. With a real-time approach, data can be collected from cell cultures or microtissues at multiple time points after addition of a drug compound or other event, and the response to treatment continually observed.

The CellToxโ„ข Green assay is a real-time assay that monitors cytotoxicity using a fluorescent DNA binding dye, which binds DNA released from cells upon loss of membrane integrity. The dye cannot enter intact, live cells and so fluorescence only occurs upon cell death, correlating with cytotoxicity. Here’s a quick overview showing how the assay works:

More Data Using Fewer Samples and Reagents
The ability to continually monitor cytotoxicity in this way makes it easy to conduct more than one type of analysis on a single sample. Assays can be combined to determine not only the timing of cytotoxicity, but to also understand related events happening in the same cell population. As long as the readouts can be distinguished from one another multiple assays can be performed in the same well, providing more informative data while using less cells, plates and reagents.

Combining assays in this way can reveal critical information regarding mechanism of cell death. For example, assay combinations can be used to determine whether cells are dying from apoptosis or necrosis, or to distinguish nonproliferation from cell death. Combining CellTox Green with an endpoint luminescent caspase assay or a real-time apoptosis assay allows you to determine whether observed cytotoxic effects are due to apoptosis. Cytotoxic and anti-proliferative effects can be distinguished by combining the cytotoxicity assay with a luminescent or fluorescent cell viability assay.

Continue reading “A Better Way to Understand How and Why Cells Die”

The Free Scientific Resource: Evaluating the Accuracy of Wikipedia

Several weeks ago, I came across an article on ScienceNews.org about how Wikipedia is becoming a scientific resource, whether we like it or not. Scientists are reading Wikipedia, the article said, and itโ€™s affecting how they write. The article cited a study by researchers from MIT and Pitt that found statistical evidence of language in peer-reviewed articles being influenced by Wikipedia articles relevant to the topic. They concluded that journal articles referenced in Wikipedia are subsequently cited more than other similar articles, and that on a semantic level, Wikipedia is influencing the language of scientific journal articles at an astounding rate.

I was intrigued by the idea that reading Wikipedia affects how we later write about a subject. When I start writing about a new topic, the first thing I do is head to Wikipedia to gather a basic understanding before I dive into journal articles. Iโ€™ll skim through the overview and most relevant subsections, then check out the references to see what I should continue reading. However, the findings of the study imply that even though I donโ€™t directly use information or language from Wikipedia in my work, itโ€™s still subtly influencing how I write. Continue reading “The Free Scientific Resource: Evaluating the Accuracy of Wikipedia”

Which DNA Do I Use? How to Choose Your Control and Other DNA Samples

 

DNA double helix molecules and chromosomes.

Today’s Promega Connections blog is written by guest blogger Joliene Lindholm, Promega Technical Services Scientist.

In Promega Technical Services, we are frequently asked questions about choosing among our Human Genomic DNA products. Promega offers DNA that can serve as sources of normal human gene sequences or positive controls where genotype is not critical, and controls for use in genotyping applications like STR analysis. For mouse researchers, we also offer Mouse Genomic DNA. Continue reading “Which DNA Do I Use? How to Choose Your Control and Other DNA Samples”

A Cell Viability Assay for Today

Valued for ease of use and scalability, plate-based, bioluminescent cell viability assays are widely used to support research in biologics, oncology and drug discovery.

Cell viability assays are a bread-and-butter method for many researchers using cultured cells โ€”everyday lab tools that are a part of many newsworthy papers, but rarely make news themselves.

Over time, cell viability assays have become easier to use and more โ€œplug โ€˜n playโ€. Among modern assays, luminescent plate-reader based systems have been a favorite for several years because of their superior sensitivity, robustness, simple protocols and uncomplicated equipment requirements (all you need is a plate-reading luminometer). These qualities combine to allow easy scalability and adaptability from bench research to high throughput applications.

CellTiter-Gloยฎ Luminescent Cell Viability Assay is an accepted go-to viability assay for many researchers. The assay measures ATP as an indicator of metabolically active cells. A quick search on Google Scholar returns 3,990 CellTiter-Glo results for 2017 and over 500 so far in January and February of 2018. A sampling of these recent publications gives a snapshot of some of the ways the CellTiter-Glo assay is used to support key areas of research today.

Does a treatment kill cells?

The obvious application of a cell viability assay is to understand whether cells are alive. In cancer research, the CellTiter-Glo assay is often used to confirm killing of tumor cells and to verify that normal cells survive. Therefore, these assays are a key part of the evaluation and screening of drug candidates and other therapies for cancer. Many papers reporting use of CellTiter-Glo are developing and evaluating the effectiveness of novel anti-cancer treatments. Continue reading “A Cell Viability Assay for Today”

National Optimism Monthโ€”Make it a Year

People working togetherToday’s Promega Connections blog is written by guest blogger Tori Sheldon, North America Marketing and Events Coordinator.

It is crazy to think how quickly the months fly by. It feels like yesterday I was watching the ball drop as 2017 turned to 2018. Now it is almost March, when Wisconsin starts to emerge from the cold winter. March also happens to be National Optimism Month.

As I think about optimism, I am reminded of one of the core values that guide interpersonal relationships at Promega: โ€œlook for the good, with discernmentโ€.ย  The spirit of this value is to remember that deep down everyone is trying to come from a positive place and that even though we may not always agree with each other it is an opportunity for further discussion and collaboration.

This value is a part of the Emotional & Social Intelligence (ESI) program at Promega. Continue reading “National Optimism Monthโ€”Make it a Year”

Adventure in Belize

Today’s blog post is written by guest blogger, Josh Agate, Manager, Global CRM.

Picture from airplane approaching Ambergis Caye
Approaching Ambergis Caye.

Adventure is relative. Most people are looking for new adventures in life, and those can range from planning where to go on vacation to starting a new job. What each person looks for in an adventure and the level of thrill they seek is different. When I learned that Promega had awarded me a trip to a destination of my choice with my family for my job performance, I was excited to plan this new adventure with my wife and two daughters (ages 4 and 6). We decided on a trip to Belize.

The trip required two commercial flights, followed by a puddle jumper flight (with hand-written boarding passes), and a 30 minute boat ride before we arrived at our hotel on the island of Ambergris Caye.ย  This island, off the northern coast of Belize, would provide the backdrop for our familyโ€™s greatest adventure to date. The trip to get to the island wasnโ€™t tedious travel for them; it was a wild ride that included a plane that held 12 people, flying over crystal clear waters and a boat trip, where our hair flew wildly as we were sprayed with ocean mist. Continue reading “Adventure in Belize”

Weird samples? Contact Tech Serv to find the right DNA purification kit for you.

โ€œDear Tech Serv,
We would like to detect DNA collected from swabs rubbed on the inside thighs of frogs. What would be the best DNA extraction kit to use for this?โ€

โ€œHi Tech Serv,
I need to find out a suitable kit for extracting DNA from bird fecal samples. Can I use ReliaPrepโ„ข gDNA Tissue Miniprep System for that?โ€

These are just some examples of unconventional sample type inquiries that the Promega Technical Services Team receives regularly from scientists around the world. Many of these inquiries land in the hands of Technical Services Scientist, Paraj Mandrekar (a.k.a. โ€œsample type guruโ€).

Continue reading “Weird samples? Contact Tech Serv to find the right DNA purification kit for you.”

The Amazing, Indestructibleโ€”and Cuddlyโ€”Tardigrade

Everyone has their favorite microscopic creatureโ€”you all do have a favorite, right? Mine is unquestionably the tardigrade. Tardigrades, also called water bears or moss piglets, are microscopic invertebrates that are composed of five segments: one head segment and four body segments, each with a pair of legs. They are 0.1โ€“1.2mm in length, making them easy to see under low magnification, and have a brain and well-developed nervous system. Tardigrades are found in just about every environment on earth. Termed โ€œextremophilesโ€, they have adapted to survive in even extremely harsh environments. Your neighborhood pond? The Himalayas? Antarctica? Deep sea? Tardigrades live in all those places.

Although many of us fell in love with these microscopic animals the first time we saw themโ€”because there is no denying that they are darn cuteโ€” there are other good reasons why scientists are so fascinated by these creatures. Tardigrades are incredibly resilient. And by resilient, I mean almost indestructible. Continue reading “The Amazing, Indestructibleโ€”and Cuddlyโ€”Tardigrade”

Get Out and Count: The Great Backyard Bird Count of 2018

2018 has been designated โ€œThe Year of the Birdโ€, and beginning today, Friday, February 16, 2018, bird lovers around the world will grab their binoculars, fill their bird feeders, update their eBird app, and look toward the skies. The 21st Annual Great Backyard Bird Count, one of the largest and longest running citizen science projects, begins today, and you can be part of this grand event of data collection.

All it takes is a mobile device (or computer) to log your results, an account at gbbc.birdcount.orgย , and 15 minutes of your time during the four-day event.

Canโ€™t tell a red-tailed hawk from a red-winged black bird? Thatโ€™s okay. The GBBC web site provides a handy online bird guide. ย The web site also provides a guide for tricky bird IDs, including: Which Red Finch is it, Identifying Some Common Sparrows, and Identifying Doves.

I recently spent some time talking to Brian Schneider, one of the educators at the Aldo Leopold Nature Center in Monona, WI, to get some tips for first-time birders. Continue reading “Get Out and Count: The Great Backyard Bird Count of 2018”

It’s a Girl! Welcoming Black-Footed Ferret Kit Elizabeth Ann!!

Updated February 2021.

In February 2018 we wrote about a resurrection effort to bring the then endangered black-footed ferret back from the brink of extinction in western U.S. This effort was undertaken by the U.S. Fish and Wildlife Service, with assistance from Revive & Restore and partners ViaGen Pets & Equine, San Diego Zoo Global and the Association of Zoos and Aquariums.

On February 18, the U.S. Fish and Wildlife Service announced announced the successful cloning of a black-footed ferret, introducing the world to a 38-day-old black-footed ferret kit โ€œElizabeth Annโ€ cloned from cells of a female ferret that died in 1988.

Cells from ferret, โ€œWillaโ€ were preserved by freezing, and when somatic cell nuclear transfer (SCNT) became a possibility, Willaโ€™s cells were used to create Elizabeth Ann, the kit born just over one month ago.

Before Elizabeth Annโ€™s birth there were upwards of 1,000 black-footed ferrets alive in the western U.S., but they were all descendants of just 7 ferrets, and thus genetically very similar.

Analysis of Elizabeth Annโ€™s genome has revealed more than three times the genetic variants found in the existing wild U.S. ferrets. This means that if she is able to reproduce, her contribution to the genetic diversity of wild ferrets would be huge.

Interested in learning more about ferrets and the challenges theyโ€™ve faced in surviving and thriving in the wild? Below is our original 2018 blog with those details. Donโ€™t miss the video clip of a young black-footed ferret doing the โ€œweasel war danceโ€ (below).

Continue reading “It’s a Girl! Welcoming Black-Footed Ferret Kit Elizabeth Ann!!”